生物資訊中心 (Bioinformatics Center)

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PC-clusters

Advantages of using PC cluster for bioinformatics studies

Bioinformatics and PC cluster computing (in Chinese)

Important events

1/1/2002   Published PALSdb on the database issue of Nucleic. Acids Res.
12/30/2001   Install a 6-node (PCC-6) PC cluster for structural bioinformatics
12/28/2001   Memorial symposium for Prof. Wang
12/24/2001   Finished the annotation of Ling-Chi draft sequences
12/20/2001   Installed 12-node (PCC-5) PC cluster for computation
7/19/2001   Attend ISMB meeting to report bioinformatics
7/10/2001   Merged the 3-node and 6-node PC cluster with 16-node cluster for products
6/15/2001   Refined the 4-node PC cluster
4/22/2001 Attend RECOMB 2001 meeting to report genome-wide motif scanning
4/1/2001 Test LSF
1/18/2001 Submit abstract to RECOMB (Research in Computational Biology)
12/4/2000 Test Enfuzion
11/16/2000 First workgroup meeting for biocluster project
11/11/2000 Yang finished writing the draft proposal for biocluster topology and specification
11/8/2000 Installed fourth 16-node (PCC-4) PC cluster for distributed and parallel computing
11/7/2000           Initiating meeting for biocluster project - decided to propose hardware specifications in a week
10/25/2000 Test NQS
10/5/2000 Test PBS
9/26/2000 Implemented high throughput blast analysis on third cluster - routine service by bioinformatics core lab
728//2000 Yu-Huei Liao defended his thesis on "Discovering novel genes using expressed sequence tag information"
7/25/2000 Built third 3-node (PCC-3) PC cluster for parallel computing - install DQS and PVM on the same system
7/15/2000 Reported our prediction of SCA disease genes computed by 6-node cluster in Biotech 2000 symposium at Chicago
5/8/2000 Finished level 2 annotation of the VGH-YM ten million base sequencing project using the 4-node and 6-node PC clusters
4/20/2000 Construct second 6-node (PCC-2) PC cluster for the VGH-YM ten million base sequence annotation project
4/15/2000 Yu-Huei Liao test run PVM version of HMMER on a 2-node testing cluster
1/30/2000 Report application results in the "Molecular and cellular biology" meeting at Ken-Ding
10/22/1999 Use PC cluster for genome annotation (distributed computing) - first computing service by bioinformatics core lab
10/1/1999 Set up first 4-node (PCC-1) PC cluster
9/8/1999 Yuh-Fan Liu learn how to use PC cluster at NCHC
6/11/1999 Ueng-Cheng Yang visit Prof. Lee's lab at UCLA, which has a PC cluster of 75 nodes
5/18/1999 Dr. Ho show Ueng-Cheng Yang the PC cluster at NCHC
Ueng-Cheng Yang briefed the current status of bioinformatics in Taiwan for NCHC
 

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Last updated on 8/13/2001