Analysis of TFIIIA Genomic Sequence

1997/8/19


按此處開始


目錄

Analysis of TFIIIA Genomic Sequence

Contents

Demo 1-1

Make it work on paper first...

Program Chosen: BestFit

Global vs Local Alignments

Global vs Local Alignments

Info Needed

The mRNA Initiation Site

What happened if program Gaps was used?

Sequence

Summary of Statistics

Demo 1-2

Material and Methods

DHFR-undefined-site-1

String Search

A Kind of Hash Coding:?A Dinucleotide Is Defined As a “Word”

A Lookup Table to Store the Position of Each Word

Exercise 1-1

Discussion (I): Program

Discussion (II): Parameters

Listed and Predicted Positions of Splicing Junctions

The Effect of Parameters

Alignments Using Computers

Examples

Possible Alignments

Algorithm vs Scoring Matrix

Algorithm

How to calculate the scores?

Back Tracing

Scoring Matrix

Summary

作者:楊永正

電子郵件: yang@ym.edu.tw

首頁: http://140.110.34.65/binfo-i/slides.htm

其他資訊:
If you have any question or comments, please connect with us.

Tel: (03)577-6085 ext 328 劉玉凡

Tel: (02) 826-7128 楊永正教授

若需最佳效果,請使用
Microsoft Internet Explorer
按這裡開始。

下載原始簡報