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|
Number of sequences |
Number of sequences containing AS information |
CDS |
69,790 (100%) |
7,665 (11.0%) |
EST |
3,967,134 (100%) |
95,960 (2.4%) |
¡@ |
Number of sequences |
Number of sequences containing AS information |
CDS |
38,576 (100%) |
1,893 (4.9%) |
EST |
2,519,650 (100%) |
29,502 (1.2%) |
Classification of genes |
# UniGene clusters |
||
Genes without ASSP |
10,819 (49.5%) |
||
Genes with ASSPs |
Only mRNA-supported AS |
785 (3.6%) |
11,018 (50.5%) |
Only Single EST supported AS |
4,249 (19.5%) |
||
Multiple ESTs supported AS |
5,984 (27.4%) |
||
Total |
21,837(100%) |
||
Classification of genes |
# UniGene clusters |
||
Genes without ASSP |
10,731 (63.1%) |
||
Genes with ASSPs |
Only mRNA-confirmed AS |
458 (2.7%) |
6,263 (36.9%) |
Only Single EST supported AS |
3,176 (18.7%) |
||
Multiple ESTs supported AS |
2,629 (15.5%) |
||
Total |
16,994 (100%) |
||
| The number of ESTs supporting an ASSP | ASSPs Count in human |
ASSPs Count in mosue |
| 1 EST | 18941 | 8649 |
| 2~3 ESTs | 6235 | 2442 |
| 4~7 ESTs | 2440 | 713 |
| 8~15 ESTs | 992 | 308 |
| 16~31 ESTs | 468 | 117 |
| 32~63 ESTs | 226 | 52 |
| 64~127 ESTs | 90 | 12 |
| 128~255 ESTs | 32 | 9 |
| 256~511 ESTs | 10 | 4 |
| 512~1023 ESTs | 6 | 3 |
| 1024~2047 ESTs | 6 | 1 |
| 2048~4095 ESTs | 9 | 0 |
| sum | 29,455 |
12,310 |
| Ug_id | Gene | UniGene member | AS lists(pic) | Text_Info | All seq info | Descriptions | Cytoband |
|---|---|---|---|---|---|---|---|
| Hs.2186 | EEF1G | 6047 | 30 | text | pic | eukaryotic translation elongation factor 1 gamma | 11q12.2 |
| Hs.14376 | ACTG1 | 9738 | 40 | text | pic | actin, gamma 1 | 17q25 |
| Hs.22129 | DJ1042K10.2 | 225 | 21 | text | pic | hypothetical protein | 22q13.1-q13.2 |
| Hs.62954 | FTH1 | 5158 | 39 | text | pic | ferritin, heavy polypeptide 1 | 11q13 |
| Hs.75990 | HP | 544 | 32 | text | pic | haptoglobin | 16q22.1 |
| Hs.77385 | MYL6 | 2157 | 20 | text | pic | myosin, light polypeptide 6, alkali, smooth muscle and non-muscle | 12q13.13 |
| Hs.78601 | UROD | 467 | 22 | text | pic | uroporphyrinogen decarboxylase | 1p34 |
| Hs.82208 | ACADVL | 701 | 24 | text | pic | acyl-Coenzyme A dehydrogenase, very long chain | 17p13-p11 |
| Hs.119598 | RPL3 | 6013 | 20 | text | pic | ribosomal protein L3 | 22q13 |
| Hs.166011 | CTNND1 | 525 | 25 | text | pic | catenin (cadherin-associated protein), delta 1 | 11q11 |
| Hs.169476 | GAPD | 11821 | 47 | text | pic | glyceraldehyde-3-phosphate dehydrogenase | 12p13 |
| Hs.170027 | MDM2 | 98 | 22 | text | pic | Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) | 12q14.3-q15 |
| Hs.178551 | RPL8 | 2270 | 32 | text | pic | ribosomal protein L8 | 8q24.3 |
| Hs.179661 | FKBP1A | 4342 | 34 | text | pic | FK506 binding protein 1A (12kD) | 20p13 |
| Hs.181165 | EEF1A1 | 15518 | 63 | text | pic | eukaryotic translation elongation factor 1 alpha 1 | 6q14.1 |
| Hs.182426 | RPS2 | 6558 | 28 | text | pic | ribosomal protein S2 | 16p13.3 |
| Hs.182447 | HNRPC | 1881 | 25 | text | pic | heterogeneous nuclear ribonucleoprotein C (C1/C2) | 14q11.1 |
| Hs.184411 | ALB | 6334 | 36 | text | pic | albumin | 4q11-q13 |
| Hs.195464 | FLNA | 1253 | 22 | text | pic | filamin A, alpha (actin binding protein 280) | Xq28 |
| Hs.198281 | PKM2 | 4104 | 26 | text | pic | pyruvate kinase, muscle | 15q22 |
| Hs.252259 | RPS3 | 4093 | 26 | text | pic | ribosomal protein S3 | 11q13.3-q13.5 |
| Hs.274348 | BAT3 | 545 | 21 | text | pic | HLA-B associated transcript 3 | 6p21.3 |
| Hs.287820 | FN1 | 3612 | 22 | text | pic | fibronectin 1 | 2q34 |
| Hs.334822 | H19 | 2442 | 22 | text | pic | H19, imprinted maternally expressed untranslated mRNA | 11p15.5 |
| Mm.235 | Ubb | 2409 | 29 | text | pic | ubiquitin B | 11 35.0 cM |
| Mm.4063 | Ndr1 | 720 | 36 | text | pic | N-myc downstream regulated 1 | |
| Mm.7156 | Gpx3 | 1992 | 27 | text | pic | glutathione peroxidase 3 | 11 B3-B5 |
| Mm.16773 | Alb1 | 3721 | 90 | text | pic | serum albumin variant | 5 50.0 cM |
| Mm.21983 | Bhmt | 358 | 22 | text | pic | betaine-homocysteine methyltransferase | |
| Mm.25789 | Csna | 2162 | 24 | text | pic | casein alpha | 5 44.9 cM |
| Mm.27818 | Eef2 | 5250 | 24 | text | pic | eukaryotic translation elongation factor 2 | |
| Mm.196614 | Eef1a1 | 9344 | 27 | text | pic | eukaryotic translation elongation factor 1 alpha 1 | |
| Mm.197551 | Hspa8 | 4910 | 21 | text | pic | heat shock 70kD protein 8 | 9 24.0 cM |
| Mm.197554 | Ahsg | 866 | 36 | text | pic | alpha-2-HS-glycoprotein |