GCG 程式: PlotStructure

PlotStructure 程式直接讀取 PeptideStructure 程式輸出的文字檔案,而繪出一維的曲線圖,或二維的二級結構示意圖。若需要知道精確的位置可直接讀取 *.p2s 的文字檔 (例如 tfiiia.p2s) 的第三、四欄。

範例 請用 PlotStructure 程式,在電腦上繪出 TFIIIA 二級結構的示意圖,並將抗原性(antigenic index) 標幟於其上

%plotstructure

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Process set to plot with VT340 attached to term
using the tekd graphic interface.

PLOTSTRUCTURE of what PEPTIDESTRUCTURE output file ?
tfiiia.p2s
tfiiia.p2s is PEPTIDESTRUCTURE of: tfiiia.pro check: 8657 from: 1 to: 344 calculated on: January 1, 1997 14:59
Plot Begin (* 1 *)
Plot End (* 344 *)
Do you want a 1)-dimensional (
panel graph) or a 2)-dimensional (squiggly) plot Please choose one (* 2 *) :

Do you want to plot the
C)hou-Fasman or the
G)arnier-Osguthorpe-Robson predictions
Please choose one (* C *) :

Superimpose over the squiggly plot:
H)ydrophilicity,
S)urface probability,
F)lexibility,
A)ntigenic index or
N)othing
Please choose one (* H *) : a
What antigenic index threshold (* 1.2 *) ?
When your VT340 attached to tty is ready, press <return>.

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Last updated on 11/23/01